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Richard Torenvliet
eos
Commits
299683e4
Commit
299683e4
authored
Dec 18, 2016
by
Patrik Huber
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Added transparent Python conversion for cv::Mat
Also updated documentation
parent
1c48b1fc
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1
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157 additions
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2 deletions
+157
-2
python/pybind11_opencv.hpp
python/pybind11_opencv.hpp
+157
-2
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python/pybind11_opencv.hpp
View file @
299683e4
...
...
@@ -12,6 +12,7 @@
#include "pybind11/numpy.h"
#include "opencv2/core/core.hpp"
#include "opencv2/core/types_c.h"
#include <iostream>
...
...
@@ -20,9 +21,17 @@ NAMESPACE_BEGIN(detail)
/**
* @file python/pybind11_opencv.hpp
* @brief Transparent conversion to and from Python for OpenCV vectors.
* @brief Transparent conversion to and from Python for OpenCV vector and matrix types.
*
* OpenCV and numpy both use row-major storage order by default, so the conversion works
* pretty much out of the box, even for multi-channel matrices.
* Handling of non-standard strides is not implemented.
* Handling of column-major numpy arrays is unsupported.
*/
/**
* @brief Transparent conversion for OpenCV's cv::Vec types to and from Python.
*/
template
<
typename
T
,
int
N
>
struct
type_caster
<
cv
::
Vec
<
T
,
N
>>
{
...
...
@@ -32,7 +41,7 @@ struct type_caster<cv::Vec<T, N>>
bool
load
(
handle
src
,
bool
)
{
a
rray_t
<
Scalar
>
buf
(
src
,
true
);
a
uto
buf
=
array_t
<
Scalar
>::
ensure
(
src
);
if
(
!
buf
)
return
false
;
...
...
@@ -67,5 +76,151 @@ struct type_caster<cv::Vec<T, N>>
_
(
"["
)
+
_
<
num_elements
>
()
+
_
(
"]]"
));
};
/**
* @brief Helper function to convert a Python array to a cv::Mat.
*
* This is an internal helper function that converts a pybind11::array to a cv::Mat.
* - The \p opencv_depth given must match the type of the data in \p buf.
* - \p buf must be a 1, 2 or 3-dimensional array.
* - The function expects a valid \p buf object.
*
* The buffer's mutable_data() is used directly, and I think no data is copied.
*
* @param buf Python buffer object.
* @param opencv_depth OpenCV "depth" (the data type, e.g. CV_8U).
* @return A cv::Mat pointing to the buffer's data or an empty Mat if an error occured.
*/
cv
::
Mat
pyarray_to_mat
(
pybind11
::
array
buf
,
int
opencv_depth
)
{
cv
::
Mat
value
;
if
(
buf
.
ndim
()
==
1
)
{
// A numpy array, with only one dimension. A row-vector.
auto
num_elements
=
buf
.
shape
(
0
);
auto
opencv_type
=
CV_MAKETYPE
(
opencv_depth
,
1
);
value
=
cv
::
Mat
(
1
,
num_elements
,
opencv_type
,
buf
.
mutable_data
());
}
else
if
(
buf
.
ndim
()
==
2
)
{
// We got a matrix (but it can also be 1 x n or n x 1)
auto
opencv_type
=
CV_MAKETYPE
(
opencv_depth
,
1
);
value
=
cv
::
Mat
(
buf
.
shape
(
0
),
buf
.
shape
(
1
),
opencv_type
,
buf
.
mutable_data
());
}
else
if
(
buf
.
ndim
()
==
3
)
{
// We got something with 3 dimensions, i.e. an image with 2, 3 or 4 channels (or 'k' for that matter)
auto
num_chans
=
buf
.
shape
(
2
);
// Check whether 3 or 4 and abort otherwise??
auto
opencv_type
=
CV_MAKETYPE
(
opencv_depth
,
num_chans
);
value
=
cv
::
Mat
(
buf
.
shape
(
0
),
buf
.
shape
(
1
),
opencv_type
,
buf
.
mutable_data
());
}
else
{
// buf.ndim() is not 1, 2 or 3.
return
cv
::
Mat
();
}
return
value
;
};
/**
* @brief Transparent conversion for OpenCV's cv::Mat type to and from Python.
*
* Converts cv::Mat's to and from Python. Can construct a cv::Mat from numpy arrays,
* as well as potentially other Python array types.
*
* - Supports only contiguous matrices
* - The numpy array has to be in default (row-major) storage order
* - Non-default strides are not implemented.
*
* Note about strides: http://docs.opencv.org/2.4/modules/core/doc/basic_structures.html#mat-step1
* And possibly use src.elemSize or src.elemSize1.
*/
template
<
>
struct
type_caster
<
cv
::
Mat
>
{
bool
load
(
handle
src
,
bool
)
{
// Since cv::Mat has its time dynamically specified at run-time, we can't bind functions
// that take a cv::Mat to any particular Scalar type.
// Thus the data we get from python can be any type.
auto
buf
=
pybind11
::
array
::
ensure
(
src
);
if
(
!
buf
)
return
false
;
auto
pyarray_dtype
=
buf
.
dtype
();
// Todo: We should probably check that buf.strides(i) is "default", by dividing it by the Scalar type or something.
int
opencv_depth
;
if
(
pyarray_dtype
==
pybind11
::
dtype
::
of
<
std
::
uint8_t
>
())
{
opencv_depth
=
CV_8U
;
}
else
if
(
pyarray_dtype
==
pybind11
::
dtype
::
of
<
float
>
())
{
opencv_depth
=
CV_32F
;
}
else
if
(
pyarray_dtype
==
pybind11
::
dtype
::
of
<
double
>
())
{
opencv_depth
=
CV_64F
;
}
else
{
return
false
;
}
// Todo: Would be nice to add int32, as it's the default in python if you create a
// list with [1, 2, 3]. But it doesn't evaluate to true when comparing with
// all integer dtypes (int, int32, uint32, etc.).
value
=
pyarray_to_mat
(
buf
,
opencv_depth
);
if
(
value
.
empty
())
{
return
false
;
}
return
true
;
};
static
handle
cast
(
const
cv
::
Mat
&
src
,
return_value_policy
/* policy */
,
handle
/* parent */
)
{
if
(
!
src
.
isContinuous
())
{
throw
std
::
runtime_error
(
"Cannot cast non-contiguous cv::Mat objects to Python. Change the C++ code to return a contiguous cv::Mat."
);
// We could probably support that with implementing strides properly.
}
const
auto
opencv_depth
=
src
.
depth
();
const
auto
num_chans
=
src
.
channels
();
std
::
vector
<
std
::
size_t
>
shape
;
if
(
num_chans
==
1
)
{
shape
=
{
(
size_t
)
src
.
rows
,
(
size_t
)
src
.
cols
};
// if either of them is == 1, we could specify only 1 value for shape - but be careful with strides,
// if there's a col-vector, I don't think we can do it without using strides.
// Also, check what happens in python when we pass a col & row vec respectively.
}
else
if
(
num_chans
==
2
||
num_chans
==
3
||
num_chans
==
4
)
{
shape
=
{
(
size_t
)
src
.
rows
,
(
size_t
)
src
.
cols
,
(
size_t
)
num_chans
};
}
else
{
throw
std
::
runtime_error
(
"Cannot return matrices with more than 4 channels back to Python."
);
// We could probably implement this quite easily but >4 channel images/matrices don't occur often.
}
// Now return the data, depending on its type:
if
(
opencv_depth
==
CV_8U
)
{
return
array
(
pybind11
::
dtype
::
of
<
std
::
uint8_t
>
(),
shape
,
src
.
data
).
release
();
}
else
if
(
opencv_depth
==
CV_32F
)
{
return
array
(
pybind11
::
dtype
::
of
<
float
>
(),
shape
,
src
.
data
).
release
();
}
else
if
(
opencv_depth
==
CV_64F
)
{
return
array
(
pybind11
::
dtype
::
of
<
double
>
(),
shape
,
src
.
data
).
release
();
}
else
{
throw
std
::
runtime_error
(
"Can currently only return matrices of type 8U, 32F and 64F back to Python. Other types can be added if needed."
);
}
};
PYBIND11_TYPE_CASTER
(
cv
::
Mat
,
_
(
"numpy.ndarray[uint8|float32|float64[m, n, d]] (d<=4)"
));
};
NAMESPACE_END
(
detail
)
NAMESPACE_END
(
pybind11
)
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